CDS

Accession Number TCMCG051C07417
gbkey CDS
Protein Id XP_002301102.2
Location join(7857144..7857910,7858864..7859113,7859229..7859399)
Gene LOC7467207
GeneID 7467207
Organism Populus trichocarpa

Protein

Length 395aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002301066.3
Definition probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category O
Description Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01003        [VIEW IN KEGG]
KEGG_ko ko:K20869        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000139        [VIEW IN EMBL-EBI]
GO:0000271        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009832        [VIEW IN EMBL-EBI]
GO:0009834        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010208        [VIEW IN EMBL-EBI]
GO:0010383        [VIEW IN EMBL-EBI]
GO:0010410        [VIEW IN EMBL-EBI]
GO:0010413        [VIEW IN EMBL-EBI]
GO:0010417        [VIEW IN EMBL-EBI]
GO:0010584        [VIEW IN EMBL-EBI]
GO:0010927        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016051        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016763        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030198        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0033692        [VIEW IN EMBL-EBI]
GO:0034637        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042285        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043062        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044038        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0045491        [VIEW IN EMBL-EBI]
GO:0045492        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0070589        [VIEW IN EMBL-EBI]
GO:0070592        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0085029        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCAATCCGTCGAACACTCTCACAGGTTTACCAAGACCGCAGCTACCAAAACGGCGTCGCTTCAGCACAAGCTCACAAGCTCTTCAGCACTAACAACAACAGCGGCAAGTATTCTTCCTTGACCTCCACCTCCGCCGTCGCAGCAGCTTCCGTCTATCTCCGCCGCAAAGGATTTCGCAGATCCTTTTATAGGTGCACGATATTCTTCATCCTAGGGCTTTTACTTGGTATCTTCCCGTTTGGTCAAGTGGATAACGATATCAATAAGCATGATTTCTCCTTCGAAATGAAGCCGCCACATGTCAATGTCCAATTGGACACCAAAGATAATTTCGCTCTCGCTGCCGTGTCCCTCGGCGTCGAGAAAACGACACCGCAATTGGATCGATTTTCAAGGTTTGATTATGTAGAGCGAAAGCAAGTGATAGTGATAACACCGACATATAATCGAGCATTACAAGCCTACTTCTTGAATAGATTAGGTCAGGTGTTGAGGTTAGTGCAGCCGCCGTTGTTGTGGATTGTGGTGGAGATGACGTCAGCATCGGCGGAGACAGCGGAGATATTGAGGAAAACCGGGGTGATGTATAGGCATTTGGTTTGTGTTAATAAGAATAACACGAATGTGAAGGACAGAGGAGTGCATCAGAGGAATGCGGGATTGGAGCATATAGAAAGGCATAGACTTGATGGGATTGTGTATTTTGCTGATGATGATAATGTATATTCGCTTCAATTGTTTGAGAGCTTGAGAAATATCAGTCATTTTGGTACTTGGCCTGTTGCAATGCTTGCACAAAGCAAAAACAAAGCAATTGTGGAAGGTCCGGTATGCAATGCCAGTCAAGTAATTGGATGGCACACAAATGAGAAAAGTAAAAGACTCCGCAGGTTTCATGTTGATATGTCTGGATTTGCTTTCAACAGCACCATCTTGTGGGACCCAAAGAGATGGAACCGCCCCTTTTCAAATCCAATTCGACAGTTAGATACAGTGAAGGAGGGTTTTCAAGAGACCACATTCATTGAGCAAGTGGTAGAAGATGAAAGTCAAATGGAAAGTGTACCACCCAGCTGTTCAAGGATACTGAACTGGCATCTTCATTTAGATGCTCATGGTCTTGTCTATCCCAGAGGCTGGCTGCTCCAGAAGAACCTAGAAGTTGTTCAGCCCATCAAGTGA
Protein:  
MASIRRTLSQVYQDRSYQNGVASAQAHKLFSTNNNSGKYSSLTSTSAVAAASVYLRRKGFRRSFYRCTIFFILGLLLGIFPFGQVDNDINKHDFSFEMKPPHVNVQLDTKDNFALAAVSLGVEKTTPQLDRFSRFDYVERKQVIVITPTYNRALQAYFLNRLGQVLRLVQPPLLWIVVEMTSASAETAEILRKTGVMYRHLVCVNKNNTNVKDRGVHQRNAGLEHIERHRLDGIVYFADDDNVYSLQLFESLRNISHFGTWPVAMLAQSKNKAIVEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWNRPFSNPIRQLDTVKEGFQETTFIEQVVEDESQMESVPPSCSRILNWHLHLDAHGLVYPRGWLLQKNLEVVQPIK